Packages JSON API

Open

Information about packages in this universe

All packages in 'blaserlab' (JSON format)All packages 'blaserlab' (NDJSON stream)ArchRAzimuthblaseRdatablaseRtemplatesblaseRtoolsBPCellsChrAccRChrAccRexcisTopicDAseqdatascience.curriculumDDRTreedotwhiskerDoubletFindergenbankrgenotyping.functionsggseqlogoGOsummariesivprobitloupeRmarginsmdthemesmhurdlemonocle3muLogRmuReportRmuRtoolspenalizedRcisTargetRcppRollrdocRforMassSpectrometryrsparseSCENICSCopeLoomRSeuratDataSeuratWrappersspeedglmtidyproteomicsTxDb.Drerio.UCSC.danRer11.ensGene

Export datasets

Download

Export datasets to various formats

ArchR::geneAnnoHg19 (SimpleGenomicRangesList)ArchR::geneAnnoHg19test (SimpleGenomicRangesList)ArchR::geneAnnoHg38 (SimpleGenomicRangesList)ArchR::geneAnnoMm10 (SimpleGenomicRangesList)ArchR::geneAnnoMm9 (SimpleGenomicRangesList)ArchR::genomeAnnoHg19 (SimpleList)ArchR::genomeAnnoHg19test (SimpleList)ArchR::genomeAnnoHg38 (SimpleList)ArchR::genomeAnnoMm10 (SimpleList)ArchR::genomeAnnoMm9 (SimpleList)blaseRdata::Drerio (BSgenome)blaseRdata::Hs_ens_hgnc_uniprot (tbl_df)blaseRdata::Hsapiens (BSgenome)blaseRdata::dr11_remove_genes (character)blaseRdata::dr11_tss (GRanges)blaseRdata::e4_PRKCD_trace (Trace)blaseRdata::hg38_granges (GRanges)blaseRdata::hg38_granges_reduced (GRanges)blaseRdata::hg38_remove_genes (character)blaseRdata::hg38_tss (GRanges)blaseRdata::meme (character)blaseRdata::mm39_remove_genes (character)blaseRdata::msigdb_geneset_metadata (tbl_df)blaseRdata::msigdb_genesets (list)blaseRdata::vig_qc_res (list)blaseRdata::vignette_cds (cell_data_set)blaseRdata::vignette_pseudobulk_res (list)blaseRdata::vignette_top_markers (spec_tbl_df)blaseRdata::wordhash (tbl_df)blaseRdata::zf_prkcda_trace (Trace)blaseRdata::zfin_granges (GRanges)blaseRdata::zfin_granges_reduced (GRanges)BPCells::human_gene_mapping (character)BPCells::mouse_gene_mapping (character)DAseq::X.2d.melanoma (matrix)DAseq::X.label.info (data.frame)DAseq::X.label.melanoma (character)DAseq::X.melanoma (matrix)ggseqlogo::pfms_dna (list)ggseqlogo::seqs_aa (list)ggseqlogo::seqs_dna (list)GOsummaries::gs_kmeans (gosummaries)GOsummaries::gs_limma (gosummaries)GOsummaries::gs_limma_exp (gosummaries)GOsummaries::gs_pca (gosummaries)GOsummaries::metabolomic_example (list)GOsummaries::metagenomic_example (list)GOsummaries::tissue_example (list)ivprobit::eco (tbl_df)mhurdle::Interview (data.frame)penalized::nki70 (data.frame)RcisTarget::dbRegionsLoc_hg19_v9 (GRanges)RcisTarget::motifAnnotations (data.table)RcisTarget::motifAnnotations (data.table)RcisTarget::motifAnnotations (data.table)RcisTarget::motifAnnotations_dmel_v8 (data.table)RcisTarget::motifAnnotations_dmel_v9 (data.table)RcisTarget::motifAnnotations_hgnc_v9 (data.table)RcisTarget::motifAnnotations_mgi_v9 (data.table)speedglm::data1 (data.frame)tidyproteomics::hela_peptides (tidyproteomics)tidyproteomics::hela_proteins (tidyproteomics)

csvxlsxjsonndjsonRDatards

Download snapshot

Download

Download a full copy of the cran-like repository with docs, to mirror or backup.

Optional filters (defaults include everything):

Source packages

Windows binaries

MacOS binaries

Linux binaries

WebAssembly binaries

Package docs

Binaries for R-4.4

Binaries for R-4.3

ArchRAzimuthblaseRdatablaseRtemplatesblaseRtoolsBPCellsChrAccRChrAccRexcisTopicDAseqdatascience.curriculumDDRTreedotwhiskerDoubletFindergenbankrgenotyping.functionsggseqlogoGOsummariesivprobitloupeRmarginsmdthemesmhurdlemonocle3muLogRmuReportRmuRtoolspenalizedRcisTargetRcppRollrdocRforMassSpectrometryrsparseSCENICSCopeLoomRSeuratDataSeuratWrappersspeedglmtidyproteomicsTxDb.Drerio.UCSC.danRer11.ensGene