1. ArchR::geneAnnoHg19
    rda| rds
    SimpleGenomicRangesList
  2. ArchR::geneAnnoHg19test
    rda| rds
    SimpleGenomicRangesList
  3. ArchR::geneAnnoHg38
    rda| rds
    SimpleGenomicRangesList
  4. ArchR::geneAnnoMm10
    rda| rds
    SimpleGenomicRangesList
  5. ArchR::geneAnnoMm9
    rda| rds
    SimpleGenomicRangesList
  6. ArchR::genomeAnnoHg19
    rda| rds
    SimpleList
  7. ArchR::genomeAnnoHg19test
    rda| rds
    SimpleList
  8. ArchR::genomeAnnoHg38
    rda| rds
    SimpleList
  9. ArchR::genomeAnnoMm10
    rda| rds
    SimpleList
  10. ArchR::genomeAnnoMm9
    rda| rds
    SimpleList
  11. blaseRdata::Drerio
    Drerio
    rda| rds
    BSgenome
  12. blaseRdata::Hs_ens_hgnc_uniprot
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|38353 x 3
  13. blaseRdata::Hsapiens
    Hsapiens
    rda| rds
    BSgenome
  14. blaseRdata::dr11_remove_genes
    Genes to Remove from ScRNA-seq Analysis: Zebrafish
    json| rda| rds
    character
  15. blaseRdata::dr11_tss
    Zebrafish Gene TSS
    rda| rds
    GRanges
  16. blaseRdata::e4_PRKCD_trace
    rda| rds
    Trace
  17. blaseRdata::hg38_granges
    Human Gene Model
    rda| rds
    GRanges
  18. blaseRdata::hg38_granges_reduced
    Reduced Human Gene Model
    rda| rds
    GRanges
  19. blaseRdata::hg38_remove_genes
    Genes to Remove from ScRNA-seq Analysis: Human
    json| rda| rds
    character
  20. blaseRdata::hg38_tss
    Human Gene TSS
    rda| rds
    GRanges
  21. blaseRdata::meme
    Jaspar 2020 TF Motifs
    json| rda| rds
    character
  22. blaseRdata::mm39_remove_genes
    Genes to Remove from ScRNA-seq Analysis: Mouse
    json| rda| rds
    character
  23. blaseRdata::msigdb_geneset_metadata
    Broad Institute MSIGDB Gene Set Metadata
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|32796 x 18
  24. blaseRdata::msigdb_genesets
    Broad Institute MSIGDB Gene Sets
    csv| json| rda| rds
    list
  25. blaseRdata::vig_qc_res
    Vignette QC Results
    rda| rds
    list
  26. blaseRdata::vignette_cds
    ScRNA-seq Vignette CDS
    rda| rds
    cell_data_set
  27. blaseRdata::vignette_pseudobulk_res
    BlaseRtools ScRNA-seq Vignette CDS Pseudobulk Results
    rda| rds
    list
  28. blaseRdata::vignette_top_markers
    BlaseRtools ScRNA-seq Vignette CDS Top Markers
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|1100 x 11
  29. blaseRdata::wordhash
    Wordlist Hashtable
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|226857 x 2
  30. blaseRdata::zf_prkcda_trace
    rda| rds
    Trace
  31. blaseRdata::zfin_granges
    Zebrafish Gene Model
    rda| rds
    GRanges
  32. blaseRdata::zfin_granges_reduced
    Reduced Zebrafish Gene Model
    rda| rds
    GRanges
  33. BPCells::human_gene_mapping
    Gene Symbol Mapping data
    json| rda| rds
    character
  34. BPCells::mouse_gene_mapping
    Gene Symbol Mapping data
    json| rda| rds
    character
  35. DAseq::X.2d.melanoma
    t-SNE embedding of the melanoma dataset
    csv| json| rda| rds
    matrix|16291 x 2
  36. DAseq::X.label.info
    Sample label information
    csv| xlsx| json| ndjson| rda| rds
    data.frame|48 x 2
  37. DAseq::X.label.melanoma
    Cell sample labels of the melanoma dataset
    json| rda| rds
    character
  38. DAseq::X.melanoma
    Top 10 PCs of the melanoma dataset
    csv| json| rda| rds
    matrix|16291 x 10
  39. ggseqlogo::pfms_dna
    List of position frequency matrices for transcription factors
    json| rda| rds
    list
  40. ggseqlogo::seqs_aa
    List of aligned kinase-substrate binding sequences
    json| rda| rds
    list
  41. ggseqlogo::seqs_dna
    List of aligned transcription factor binding sequences
    json| rda| rds
    list
  42. GOsummaries::gs_kmeans
    Example gene expression dataset
    rda| rds
    gosummaries
  43. GOsummaries::gs_limma
    Example gene expression dataset
    rda| rds
    gosummaries
  44. GOsummaries::gs_limma_exp
    Example gene expression dataset
    rda| rds
    gosummaries
  45. GOsummaries::gs_pca
    Example gene expression dataset
    rda| rds
    gosummaries
  46. GOsummaries::metabolomic_example
    Example metabolomic dataset
    json| rda| rds
    list
  47. GOsummaries::metagenomic_example
    Example metagenomic dataset
    json| rda| rds
    list
  48. GOsummaries::tissue_example
    Example gene expression dataset
    rda| rds
    list
  49. ivprobit::eco
    Foreign-Exchange Derivatives Use By Large U.S. Bank Holding Com-panies (1996-2000).
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|794 x 22
  50. mhurdle::Interview
    Interview
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1000 x 31
  51. penalized::nki70
    The 70 gene signature of the Netherlands Cancer Institute for prediction of metastasis-free survival, measured on 144 independent lymph node positive patients.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|144 x 77
  52. RcisTarget::dbRegionsLoc_hg19_v9
    Genomic location for the database regions
    rda| rds
    GRanges
  53. RcisTarget::motifAnnotations
    Annotations of Motifs to TFs
    csv| xlsx| json| ndjson| rda| rds
    data.table|160315 x 7
  54. RcisTarget::motifAnnotations
    Annotations of Motifs to TFs
    csv| xlsx| json| ndjson| rda| rds
    data.table|253096 x 8
  55. RcisTarget::motifAnnotations
    Annotations of Motifs to TFs
    csv| xlsx| json| ndjson| rda| rds
    data.table|252126 x 7
  56. RcisTarget::motifAnnotations_dmel_v8
    Annotations of Motifs to TFs
    csv| xlsx| json| ndjson| rda| rds
    data.table|54676 x 7
  57. RcisTarget::motifAnnotations_dmel_v9
    Annotations of Motifs to TFs
    csv| xlsx| json| ndjson| rda| rds
    data.table|88081 x 7
  58. RcisTarget::motifAnnotations_hgnc_v9
    Annotations of Motifs to TFs
    csv| xlsx| json| ndjson| rda| rds
    data.table|163192 x 7
  59. RcisTarget::motifAnnotations_mgi_v9
    Annotations of Motifs to TFs
    csv| xlsx| json| ndjson| rda| rds
    data.table|163338 x 7
  60. speedglm::data1
    A toy dataset
    csv| xlsx| json| ndjson| rda| rds
    data.frame|100 x 4
  61. tidyproteomics::hela_peptides
    A sample tidyproteomics data object
    rda| rds
    tidyproteomics
  62. tidyproteomics::hela_proteins
    A sample tidyproteomics data object
    rda| rds
    tidyproteomics