Package: SeuratData 0.2.2.9002

Paul Hoffman

SeuratData: Install and Manage Seurat Datasets

Single cell RNA sequencing datasets can be large, consisting of matrices that contain expression data for several thousand features across several thousand cells. This package is designed to easily install, manage, and learn about various single-cell datasets, provided Seurat objects and distributed as independent packages.

Authors:Rahul Satija [aut], Paul Hoffman [aut, cre], Andrew Butler [aut], Austin Hartman [ctb], Yuhan Hao [ctb], Gesmira Molla [ctb]

SeuratData_0.2.2.9002.tar.gz
SeuratData_0.2.2.9002.zip(r-4.7)SeuratData_0.2.2.9002.zip(r-4.6)SeuratData_0.2.2.9002.zip(r-4.5)
SeuratData_0.2.2.9002.tgz(r-4.6-any)SeuratData_0.2.2.9002.tgz(r-4.5-any)
SeuratData_0.2.2.9002.tar.gz(r-4.7-any)SeuratData_0.2.2.9002.tar.gz(r-4.6-any)
SeuratData_0.2.2.9002.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
SeuratData/json (API)

# Install 'SeuratData' in R:
install.packages('SeuratData', repos = c('https://blaserlab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/satijalab/seurat-data/issues

Pkgdown/docs site:https://www.satijalab.org

On CRAN:

Conda:

datasetssingle-cellsingle-cell-genomics

7.49 score 154 stars 4.5k scripts 6 exports 143 dependencies

Last updated from:3e51f44303. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK363
source / vignettesOK392
linux-release-x86_64OK412
macos-release-arm64OK242
macos-oldrel-arm64OK212
windows-develOK382
windows-releaseOK426
windows-oldrelOK365
wasm-releaseOK340

Exports:AvailableDataInstallDataInstalledDataLoadDataRemoveDataUpdateData

Dependencies:abindaskpassbase64encBHbitopsbslibcachemcaToolscliclustercodetoolscommonmarkcowplotcpp11crayoncrosstalkcurldata.tabledeldirdigestdotCall64dplyrdqrngevaluatefarverfastDummiesfastmapfitdistrplusFNNfontawesomefsfuturefuture.applygenericsggplot2ggrepelggridgesglobalsgluegoftestgplotsgridExtragtablegtoolsherehighrhtmltoolshtmlwidgetshttpuvhttricaigraphirlbaisobandjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevallifecyclelistenvlmtestmagrittrMASSMatrixmatrixStatsmemoisemimeminiUInlmeopensslotelparallellypatchworkpbapplypillarpkgconfigplotlyplyrpngpolyclipprogressrpromisespurrrR6RANNrappdirsRColorBrewerRcppRcppAnnoyRcppArmadilloRcppEigenRcppHNSWRcppProgressRcppTOMLreshape2reticulaterlangrmarkdownROCRrprojrootRSpectraRtsneS7sassscalesscattermoresctransformSeuratSeuratObjectshinysitmosourcetoolsspspamspatstat.dataspatstat.explorespatstat.geomspatstat.randomspatstat.sparsespatstat.univarspatstat.utilsstringistringrsurvivalsystensortibbletidyrtidyselecttinytexutf8uwotvctrsviridisLitewithrxfunxtableyamlzoo