Package: GOsummaries 2.14.0
![](https://r-universe.dev/static/nobody.jpg)
Raivo Kolde
GOsummaries: Word cloud summaries of GO enrichment analysis
A package to visualise Gene Ontology (GO) enrichment analysis results on gene lists arising from different analyses such clustering or PCA. The significant GO categories are visualised as word clouds that can be combined with different plots summarising the underlying data.
Authors:
GOsummaries_2.14.0.tar.gz
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GOsummaries_2.14.0.tgz(r-4.4-x86_64)GOsummaries_2.14.0.tgz(r-4.4-arm64)GOsummaries_2.14.0.tgz(r-4.3-x86_64)GOsummaries_2.14.0.tgz(r-4.3-arm64)
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GOsummaries.pdf |GOsummaries.html✨
GOsummaries/json (API)
NEWS
# Install 'GOsummaries' in R: |
install.packages('GOsummaries', repos = c('https://blaserlab.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/raivokolde/gosummaries/issues
- gs_kmeans - Example gene expression dataset
- gs_limma - Example gene expression dataset
- gs_limma_exp - Example gene expression dataset
- gs_pca - Example gene expression dataset
- metabolomic_example - Example metabolomic dataset
- metagenomic_example - Example metagenomic dataset
- tissue_example - Example gene expression dataset
Last updated 6 years agofrom:a999564173. Checks:ERROR: 1 WARNING: 8. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | FAIL | Sep 03 2024 |
R-4.5-win-x86_64 | WARNING | Sep 03 2024 |
R-4.5-linux-x86_64 | WARNING | Sep 03 2024 |
R-4.4-win-x86_64 | WARNING | Sep 03 2024 |
R-4.4-mac-x86_64 | WARNING | Sep 03 2024 |
R-4.4-mac-aarch64 | WARNING | Sep 03 2024 |
R-4.3-win-x86_64 | WARNING | Sep 03 2024 |
R-4.3-mac-x86_64 | WARNING | Sep 03 2024 |
R-4.3-mac-aarch64 | WARNING | Sep 03 2024 |
Exports:add_expression.gosummariesadd_to_slot.gosummariescustomizegosummariesis.gosummariespanel_boxplotpanel_boxplot_classespanel_violinpanel_violin_boxpanel_violin_box_classespanel_violin_classesplotWordcloud
Dependencies:bitopsclicolorspacefansifarverggplot2gluegProfileRgtableisobandlabelinglatticelifecyclelimmamagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrR6RColorBrewerRcppRCurlreshape2rlangscalesstatmodstringistringrtibbleutf8vctrsviridisLitewithr