{ "_id": "6acf69e2e2d863f662951ce0", "Package": "TxDb.Drerio.UCSC.danRer11.ensGene", "Title": "Annotation package for TxDb object(s)", "Description": "Exposes an annotation databases generated from UCSC by\nexposing these as TxDb objects", "Version": "1.0.0", "Author": "Brad Blaser [cre]", "Maintainer": "Brad Blaser ", "License": "MIT + file LICENSE", "organism": "Danio rerio", "species": "Danio rerio", "provider": "UCSC", "provider_version": "danRer11 genome based on the ensGene table", "release_date": "2023-03-20 09:52:36 -0400 (Mon, 20 Mar 2023)", "resource_url": "http://genome.ucsc.edu/", "biocViews": "AnnotationData, Genetics, TxDb, Danio_rerio", "URL": "https://github.com/blaserlab/TxDb.Drerio.UCSC.danRer11.ensGene", "BugReports": "https://github.com/blaserlab/TxDb.Drerio.UCSC.danRer11.ensGene/issues", "Config/pak/sysreqs": "make libbz2-dev liblzma-dev libpng-dev libxml2-dev\nlibssl-dev xz-utils zlib1g-dev", "Repository": "https://blaserlab.r-universe.dev", "Date/Publication": "2023-03-20 18:38:33 UTC", "RemoteUrl": "https://github.com/blaserlab/TxDb.Drerio.UCSC.danRer11.ensGene", "RemoteRef": "HEAD", "RemoteSha": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-14 11:33:47 UTC", "User": "root" }, "_user": "blaserlab", "_type": "src", "_file": "TxDb.Drerio.UCSC.danRer11.ensGene_1.0.0.tar.gz", "_fileid": "https://r2.ropensci.org/26b8875952763a4bf72e3963b73dc0b5a6cd6f9c4b99d1581736cdfe68058f65", "_filesize": 16722670, "_sha256": "26b8875952763a4bf72e3963b73dc0b5a6cd6f9c4b99d1581736cdfe68058f65", "_expires": "2027-01-22T11:39:11.000Z", "_created": "2026-10-14T11:33:47.000Z", "_published": "2026-10-14T11:39:14.084Z", "_buildurl": "https://github.com/r-universe/blaserlab/actions/runs/38557008162", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 115830260814, "time": 260, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "11890624832" }, { "job": 115830260727, "time": 253, "config": "linux-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11890821013" }, { "job": 115830260682, "time": 219, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "11890344616" }, { "job": 115830260616, "time": 229, "config": "macos-release-arm64", "r": "4.6.1", "check": "NOTE", "artifact": "11890935868" }, { "job": 115828666972, "time": 240, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11889984073" }, { "job": 115830260733, "time": 133, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11890990585" }, { "job": 115830260661, "time": 234, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "11891150661" }, { "job": 115830260742, "time": 211, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "NOTE", "artifact": "11890454737" }, { "job": 115830260734, "time": 205, "config": "windows-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11890034883" } ], "_upstream": "https://github.com/blaserlab/TxDb.Drerio.UCSC.danRer11.ensGene", "_commit": { "id": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "author": "blaserlab ", "committer": "blaserlab ", "message": "Add GitHub links to DESCRIPTION\n", "time": 1679337513 }, "_maintainer": { "name": "Brad Blaser", "email": "bradley.blaser@osumc.edu", "login": "blaserlab", "orcid": "0000-0002-3168-5423", "description": "Experimental Hematologist and Fish Fancier", "uuid": 62366303 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "GenomicFeatures", "version": ">= 1.50.4", "role": "Depends" }, { "package": "AnnotationDbi", "role": "Imports" } ], "_owner": "blaserlab", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_topics": [ "annotationdata", "genetics", "txdb", "danio_rerio" ], "_stars": 0, "_contributors": [ { "user": "blaserlab", "count": 2, "uuid": 62366303 } ], "_userbio": { "uuid": 62366303, "type": "user", "name": "Brad Blaser", "followers": 9, "description": "Experimental Hematologist and Fish Fancier" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/TxDb.Drerio.UCSC.danRer11.ensGene" }, "_devurl": "https://github.com/blaserlab/txdb.drerio.ucsc.danrer11.ensgene", "_searchresults": 0, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/TxDb.Drerio.UCSC.danRer11.ensGene.html", "LICENSE" ], "_cranurl": false, "_exports": [ "TxDb.Drerio.UCSC.danRer11.ensGene" ], "_help": [ { "page": "package", "title": "Annotation package for TxDb object(s)", "topics": [ "TxDb.Drerio.UCSC.danRer11.ensGene-package", "TxDb.Drerio.UCSC.danRer11.ensGene" ] } ], "_readme": "https://github.com/blaserlab/TxDb.Drerio.UCSC.danRer11.ensGene/raw/HEAD/README.md", "_rundeps": [ "AnnotationDbi", "askpass", "BH", "Biobase", "BiocBaseUtils", "BiocGenerics", "BiocIO", "BiocParallel", "Biostrings", "bit", "bit64", "bitops", "blob", "cachem", "cigarillo", "cli", "codetools", "cpp11", "crayon", "curl", "DBI", "fastmap", "formatR", "futile.logger", "futile.options", "generics", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "glue", "httr", "IRanges", "jsonlite", "KEGGREST", "lambda.r", "lifecycle", "memoise", "mime", "openssl", "pkgconfig", "png", "R6", "RCurl", "restfulr", "Rhtslib", "rjson", "rlang", "Rsamtools", "RSQLite", "rtracklayer", "S4Vectors", "Seqinfo", "snow", "sys", "vctrs", "XML", "XVector", "yaml" ], "_score": 1.6989700043360187, "_indexed": true, "_nocasepkg": "txdb.drerio.ucsc.danrer11.ensgene", "_universes": [ "blaserlab" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.0", "date": "2026-10-14T11:36:27.000Z", "distro": "resolute", "commit": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "fileid": "https://r2.ropensci.org/42a67d5c21278b82448614b33a4cdcb7d5db34296e35277fb54741574da78ee4", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/blaserlab/actions/runs/38557008162" }, { "r": "4.6.1", "os": "linux", "version": "1.0.0", "date": "2026-10-14T11:36:23.000Z", "distro": "resolute", "commit": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "fileid": "https://r2.ropensci.org/12a8bfda5560a9454facdf87f8885ed9bd4098e0080ef8d078d9770a6b16b6e4", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/blaserlab/actions/runs/38557008162" }, { "r": "4.5.3", "os": "mac", "version": "1.0.0", "date": "2026-10-14T11:36:11.000Z", "commit": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "fileid": "https://r2.ropensci.org/14319b945b82c47d0db9c8b85b35eff4259bdb248db703c28e3c71ab0fa5e379", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/blaserlab/actions/runs/38557008162" }, { "r": "4.6.1", "os": "mac", "version": "1.0.0", "date": "2026-10-14T11:36:10.000Z", "commit": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "fileid": "https://r2.ropensci.org/098df3d3b323299f94e7ca1c2da7e84fd7f270416908cfca656474587a191575", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/blaserlab/actions/runs/38557008162" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.0", "date": "2026-10-14T11:36:23.000Z", "commit": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "fileid": "https://r2.ropensci.org/c2ddd658b22aad69755fd45ac00e3dd146b4ec7045b87fefe9bead63a60e695c", "status": "success", "buildurl": "https://github.com/r-universe/blaserlab/actions/runs/38557008162" }, { "r": "4.7.0", "os": "win", "version": "1.0.0", "date": "2026-10-14T11:35:51.000Z", "commit": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "fileid": "https://r2.ropensci.org/f77b84e58d92624952b1695f9ddaafdf0f781f249af7e360ca229596d18eb636", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/blaserlab/actions/runs/38557008162" }, { "r": "4.5.3", "os": "win", "version": "1.0.0", "date": "2026-10-14T11:36:22.000Z", "commit": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "fileid": "https://r2.ropensci.org/f2b0aa6a00fe2e3c5d7d215db769753f8248d36f463082c9f8d9f7b43084bab9", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/blaserlab/actions/runs/38557008162" }, { "r": "4.6.1", "os": "win", "version": "1.0.0", "date": "2026-10-14T11:35:51.000Z", "commit": "fa2a71b165971ceeba7a58a69a85b996a2adc71b", "fileid": "https://r2.ropensci.org/184a64259612aac6c7aeae639b38f0c89043f977df4fbdd5f8da31ab7be0ced1", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/blaserlab/actions/runs/38557008162" } ] }