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  "Title": "DoubletFinder is a suite of tools for identifying doublets in\nsingle-cell RNA sequencing data.",
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  "Description": "DoubletFinder identifies doublets by generating artificial\ndoublets from existing scRNA-seq data and defining which real\ncells preferentially co-localize with artificial doublets in\ngene expression space.  Other DoubletFinder package functions\nare used for fitting DoubletFinder to different scRNA-seq\ndatasets. For example, ideal DoubletFinder performance in\nreal-world contexts requires (I) Optimal pK selection and (2)\nHomotypic doublet proportion estimation. pK selection is\nachieved using pN-pK parameter sweeps and maxima identification\nin mean-variance-normalized bimodality coefficient\ndistributions. Homotypic doublet proportion estimation is\nachieved by finding the sum of squared cell annotation\nfrequencies.  For more information, see our Cell Sysmtes paper\nhttps://www.cell.com/cell-systems/fulltext/S2405-4712(19)30073-0\nand our github\nhttps://github.com/chris-mcginnis-ucsf/DoubletFinder",
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  "Encoding": "UTF-8",
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  "Date/Publication": "2024-02-15 23:48:04 UTC",
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