Package: CellChat
Type: Package
Title: Inference and analysis of cell-cell communication from
        single-cell and spatially resolved transcriptomics data
Version: 2.2.0.9001
Author: Suoqin Jin
Maintainer: Suoqin Jin <sqjin@whu.edu.cn>
Description: an open source R tool that infers, visualizes and analyzes
        the cell-cell communication networks from scRNA-seq and
        spatially resolved transcriptomics data.
Depends: R (>= 3.6.0),dplyr,igraph,ggplot2
License: GPL-3
Encoding: UTF-8
LazyData: TRUE
Imports: future, future.apply, pbapply, irlba, NMF (>= 0.23.0),
        ggalluvial, stringr, svglite, Matrix, ggrepel, circlize (>=
        0.4.12), RColorBrewer, cowplot, methods, ComplexHeatmap,
        RSpectra, Rcpp, reticulate, scales, sna, reshape2, FNN, shape,
        BiocGenerics, magrittr, patchwork, colorspace, plyr, ggpubr,
        ggnetwork, BiocNeighbors, plotly,shiny,bslib, collapse
LinkingTo: Rcpp, RcppEigen
Suggests: rmarkdown, knitr, roxygen2, Seurat (>= 4.0.0),
        SingleCellExperiment, SummarizedExperiment,
        purrr,uwot,gg.gap,wordcloud,bsicons,presto,tidyverse,tidyr,rlang
RoxygenNote: 7.3.1
VignetteBuilder: knitr
Config/pak/sysreqs: cmake libfontconfig1-dev libfreetype6-dev
        libfribidi-dev libglpk-dev make libharfbuzz-dev libicu-dev
        libpng-dev libuv1-dev libxml2-dev libssl-dev perl python3
        zlib1g-dev
Repository: https://blaserlab.r-universe.dev
Date/Publication: 2026-03-04 12:08:33 UTC
RemoteUrl: https://github.com/jinworks/CellChat
RemoteRef: HEAD
RemoteSha: 75253cd0c9e68410e6e721a6d3a0419a1d7e358f
NeedsCompilation: yes
Packaged: 2026-10-10 13:10:18 UTC; root