To cite package ‘ArchR’ in publications use:

Granja J, Corces R, Paiz P, Immanuel Abdi (2025). ArchR: Analyzing single-cell regulatory chromatin in R.. R package version 1.0.3, https://github.com/greenleaflab/archr.

Corresponding BibTeX entry:

  @Manual{,
    title = {ArchR: Analyzing single-cell regulatory chromatin in R.},
    author = {Jeffrey Granja and Ryan Corces and Paulina Paiz and
      {Immanuel Abdi}},
    year = {2025},
    note = {R package version 1.0.3},
    url = {https://github.com/greenleaflab/archr},
  }